Browse of TCMCG006C35665 protein

CDS

Accession Number	TCMCG006C35665
gbkey	CDS
Protein Id	XP_013750103.1
Location	join(39271524..39271547,39271812..39271878,39272054..39272207,39272312..39272469,39272808..39273073,39273170..39273388,39273480..39273588,39273696..39273811,39274116..39274214,39274342..39274451,39274733..39274807,39275213..39275291,39275384..39275530,39275608..39275688,39275796..39275915,39276209..39276331,39276725..39276802,39276918..39277006,39277203..39277311,39277400..39277468,39277552..39277659,39277929..39277984,39278055..39278232,39278322..39278423,39278503..39278574,39278709..39278774,39278932..39278997,39279430..39279516,39279600..39279716,39279846..39279920,39280004..39280090,39280186..39280227)
Gene	LOC106452507
GeneID	106452507
Organism	Brassica napus

Protein

Length	1115aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013894649.2
Definition	ubiquitin carboxyl-terminal hydrolase 13 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTGACTCCAACGCCGCTTGATCAGCAAGATGACGAGGAAATGCTCGTTCCGCATTCTGATGTGGTCGAGGGACCTCAGCCCATGGAAGTTGCTCAACCTGAGGCTGCTGCTGCTACCGCTGTGGAGAATCCTCCAGTGGAGGAGCCTCCCACTATGAAGTACACGTGGACTATACCGGGTTTCACTAGGCTGAACAACAGGAAGCATTACTCTGATGTATTTGTTGTTGGAGGGTATAAATGGAGAGTATTGATTTTTCCCAAAGGAAACAATGTTGACAATTTGTCCATGTACTTGGATGTTGCTGACGCTGCGAATTTGCCCTACGGGTGGAGCAGATTTTCGCAGTTCGGCCTGGCTATAGTTAATCAAATCAACAGCAGCTATTCCATCAGAAAAGAGAGTCAGCATCAATTCAATTCAAGAGAAAGCGACTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTTTATGATCCCACTCGTGGATATTTAGTGAATGATACTGTTGTAATTGAAGCTGAAGTTGCTGTGCGGAAGGTCCTTGATTACTGGTCATATGACTCAAAAAAAGAGACTGGTTTTGTTGGACTAAAGAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACGTTATACCACATACCTTATTTCAGAAAGGCTGTTTACCACATGCCAACAACTGAGAATGATGCACCTACGGCGAGTATCCCATTGGCGCTCCAGAGTTTGTTTTACAAGCTTCAATATAATGACACCAGTGTAGCGACAAAGGAGCTGACCAAGTCGTTTGGTTGGGATACATATGATTCGTTCATGCAACATGATGTTCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAGAAGTTATTCGAGGGTCACCACATGAATTACATAGAGTGCATCAATGTAGATTACAAATCTACACGGAAAGAATCATTCTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGAATCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGTGACAACAAATACCATGCAGAAGGACATGATTTACAGGATGCAAAAAAGGGTGTTCTGTTTATAGAATTTCCACCCGTACTTCAACTTCAGCTCAAGAGGTTTGAATATGATTTTATGCGAGACACAATGGTGAAGATAAATGATCGATATGAGTTTCCTCTTGAACTGGATCTTGACAGAGATAATAGAAAGTATTTATCCCCTGATGCTGACAAGAGTGTCCGTAATCTATACACACTTCACAGTGTCTTAGTTCATAGTGGTGGAGTGCATGGAGGCCACTATTATGCTTTTATTAGGCCAACTCTCTCAGACCAGTGGTATAAATTTGATGATGAACGGGTGACGAAGGAAGATGTGAAAAGAGCGCTGGAAGAGCAATATGGTGGTGAAGAAGAGTTGCCGCAGAATAATCCCGGTTTCAATAACCCACCTTTTAAATTCACAAAATACTCGAACGCGTACATGCTTGTTTATATTCGGGAAAGCGAGAAGGATAAAATAATCTGCAACGTTGATGAAAAAGACATTGCAGAACATTTACGGGTGAGGCTGAAAAAAGAAAAAGAAGAAAAGGAAGAGAAAAGAAAATACAAGGCTCAAGCTCACCTTTTCACGACAATCAAGGTCGCAAGAGATGAAGACATTACTGAGCAAATTGGAAAGAATAAATACTTTGATCTTGTTGATCATGAAAAAGTTAAGAGTTTCCGAATTCAGAAACAGACCCCCTTTCAACTATTTAAGGAAGAGGTGGCCAAAGAATTTGGTGTCCCGGTTGAGCTACAGCGGTTCTGGATTTGGGCAAAGCGGCAGAACTATACTTATCGGCCCAACCGCCCCCTATTACCTCATGAAGAATTACAGACGGTTGAACTTTTAAGAGAGGCATGTAACAAGACAAACAATGCTGAACTAAAGCTGTTTCTGGAAATAGAGCGCGGACCGGAGGAGCGTCCTATTCCTCCCCCAGACAAGTCATCTGCAGATATTCTCCTTTTCTTTAAGCTCTATGACCCTGAGAATGCAATTCTAAGATATGTTGGTAGGCTCATGGTGAAAAATTCCAGTAAGCCCATGGACATAGTAGGGCAATTGAATCAAATGGCTGGCTTTGCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTTGAACCTTGTGTCATGTGCGAACATCTGGATAAGAAGACTTCTTTCAGACTATCTCAAATTGAAGATGGAGATATCATATGCTTTCAGAAACCTCTTTCTATCCAGGAGAATGAATGTCCATACCCGGATGTACCATCGTTTTTGGCGTATGTACAGAATCGAGAGGTGGTGCGCTTTCGAAGTCTCGAAAAACCAAAAGAAGACGAGTTCACTATGGAGTTGTCAAAGCTGCACACGTATGATGATGTTGTCCAAAGATTAGCTGAGAAGCTTGGCCTTGATGATCCATCGAAAATTAGGCTTACTTCTCACAATTGCTACTCCCAGCAACCCAAGCCCCAGCCTATTAAATACCGTGGAGTAGACCATCTTTCAGATATGTTAGCTCACTATAATCAGACGTCTGACATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAGACTCTGAAAGTAGCTTTCCATCATGCCACAAAGGACGAGGTGGTAATCCACAATATCAGACTTCCTAAACAGAGTACTGTAGGAGATGTTATCAACGAACTTAAAACAAAGGTGGAGTTGTCGCATCCTGATGCAGAACTGAGGTTGCTGGAGGTGTTTTTCCACAAGATCTACAAGATCTTTTCATCTACGGAAAGAATTGAGAATATCAATGACCAGTACTGGACTTTACGAGCAGAGGAGATACCTGAGGAAGAGAAGAATATTGGTCCCAGTGATCGATTAGTCCATGTGTACCATTTTACTAAAGAGGCCGGACAAAATCAAGCGCAAGTACAAAATTTCGGCGAGCCGTTCTTTCTGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGTCCCGTATCCAAAAGAAGCTCCATGTACCTGATGAGGACTTCGCCAAGTGGAAGTTTGCTTCTTTCTCAATGGGACGTCCCGACTACTTGCAGGACACAGAGGTCGTTTATGATCGCTTTCAGAGAAAGGATGTATATGGTGCCTGGGAGCAGTATCTTGGGTTGGAGCACGTTGATAATGCTCCTAAAAGGGCTTATGCTGCAAATCAGAACCGACACGCATACGAGAAGCCGGTGAGAATATACAATTAG

Protein:   MVTPTPLDQQDDEEMLVPHSDVVEGPQPMEVAQPEAAAATAVENPPVEEPPTMKYTWTIPGFTRLNNRKHYSDVFVVGGYKWRVLIFPKGNNVDNLSMYLDVADAANLPYGWSRFSQFGLAIVNQINSSYSIRKESQHQFNSRESDWGFTSFMPLSELYDPTRGYLVNDTVVIEAEVAVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYESFDKYVEVERLEGDNKYHAEGHDLQDAKKGVLFIEFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDRDNRKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESEKDKIICNVDEKDIAEHLRVRLKKEKEEKEEKRKYKAQAHLFTTIKVARDEDITEQIGKNKYFDLVDHEKVKSFRIQKQTPFQLFKEEVAKEFGVPVELQRFWIWAKRQNYTYRPNRPLLPHEELQTVELLREACNKTNNAELKLFLEIERGPEERPIPPPDKSSADILLFFKLYDPENAILRYVGRLMVKNSSKPMDIVGQLNQMAGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLSQIEDGDIICFQKPLSIQENECPYPDVPSFLAYVQNREVVRFRSLEKPKEDEFTMELSKLHTYDDVVQRLAEKLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFFHKIYKIFSSTERIENINDQYWTLRAEEIPEEEKNIGPSDRLVHVYHFTKEAGQNQAQVQNFGEPFFLVIHEGETLEEIKSRIQKKLHVPDEDFAKWKFASFSMGRPDYLQDTEVVYDRFQRKDVYGAWEQYLGLEHVDNAPKRAYAANQNRHAYEKPVRIYN